機器分析実験，研究室セミナー，今週の輪読
7/4（木）から化学生態学研究室の鈴木義人先生と私が担当している食生命科学科 3 年生向けの学生実験「機器分析実験」が始まりました．7/16（火）までの日程です．
今週の研究室セミナーの文献紹介の担当は生物制御化学研究室の四年生で，以下の論文を報告しました．
Escaray, F.J. et al. (2024). Plant triterpenoid saponins function as susceptibility factors to promote the pathogenicity of Botrytis cinerea. Mol. Plant 17: 1073–1089.
今週の輪読では下記の論文を取り上げました．
2418. Tetorya, M. et al. (2023). Plant defensin MtDef4-derived antifungal peptide with multiple modes of action and potential as a bio-inspired fungicide. Mol. Plant Pathol. 24: 896–913.
2419. Newman, T.E. et al. (2023). The broad host range pathogen Sclerotinia sclerotiorum produces multiple effector proteins that induce host cell death intracellularly. Mol. Plant Pathol. 24: 866–881.
2420. Li, G. et al. (2023). Integrated microbiome and metabolomic analysis reveal responses of rhizosphere bacterial communities and root exudate composition to drought and genotype in rice (Oryza sativa L.). Rice 16: 19.
2421. Latorre, S.M. et al. (2023). Genomic surveillance uncovers a pandemic clonal lineage of the wheat blast fungus. PLOS Biol. 21: e3002052.
今週の研究室セミナーの文献紹介の担当は生物制御化学研究室の四年生で，以下の論文を報告しました．
Escaray, F.J. et al. (2024). Plant triterpenoid saponins function as susceptibility factors to promote the pathogenicity of Botrytis cinerea. Mol. Plant 17: 1073–1089.
今週の輪読では下記の論文を取り上げました．
2418. Tetorya, M. et al. (2023). Plant defensin MtDef4-derived antifungal peptide with multiple modes of action and potential as a bio-inspired fungicide. Mol. Plant Pathol. 24: 896–913.
2419. Newman, T.E. et al. (2023). The broad host range pathogen Sclerotinia sclerotiorum produces multiple effector proteins that induce host cell death intracellularly. Mol. Plant Pathol. 24: 866–881.
2420. Li, G. et al. (2023). Integrated microbiome and metabolomic analysis reveal responses of rhizosphere bacterial communities and root exudate composition to drought and genotype in rice (Oryza sativa L.). Rice 16: 19.
2421. Latorre, S.M. et al. (2023). Genomic surveillance uncovers a pandemic clonal lineage of the wheat blast fungus. PLOS Biol. 21: e3002052.
研究室セミナー & 今週の輪読
今週の研究室セミナーの文献紹介の担当は生物制御化学研究室の四年生で，以下の論文を報告しました．
Jia, X. et al. (2023). The origin and evolution of salicylic acid signaling and biosynthesis in plants. Mol. Plant 16: 245–259.
今週の輪読では下記の論文を取り上げました．
2414. Alariqi, M. et al. (2023). Cotton 4-coumarate-CoA ligase 3 enhanced plant resistance to Verticillium dahliae by promoting jasmonic acid signaling-mediated vascular lignification and metabolic flux. Plant J. 115: 190–204.
2415. Chen, M. et al. (2023). A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants. eLife 12: e81302.
2416. Zhang, J. et al. (2023). Transcriptomic and proteomic analysis reveals (E)-2-hexenal modulates tomato resistance against Botrytis cinerea by regulating plant defense mechanism. Plant Mol. Biol. 111: 505–522.
2417. Cao, Y. et al. (2023). Drug delivery in plants using silk microneedles. Adv. Mater. 35: 2205794.
Jia, X. et al. (2023). The origin and evolution of salicylic acid signaling and biosynthesis in plants. Mol. Plant 16: 245–259.
今週の輪読では下記の論文を取り上げました．
2414. Alariqi, M. et al. (2023). Cotton 4-coumarate-CoA ligase 3 enhanced plant resistance to Verticillium dahliae by promoting jasmonic acid signaling-mediated vascular lignification and metabolic flux. Plant J. 115: 190–204.
2415. Chen, M. et al. (2023). A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants. eLife 12: e81302.
2416. Zhang, J. et al. (2023). Transcriptomic and proteomic analysis reveals (E)-2-hexenal modulates tomato resistance against Botrytis cinerea by regulating plant defense mechanism. Plant Mol. Biol. 111: 505–522.
2417. Cao, Y. et al. (2023). Drug delivery in plants using silk microneedles. Adv. Mater. 35: 2205794.
研究室セミナー & 今週の輪読
今週の研究室セミナーの文献紹介の担当は化学生態学研究室の四年生で，以下の論文を報告しました．
Shen, L., Zhang, L.-h., Xia, X., Yang, S.-x., and Yang, X. (2024). Cytochrome P450 SmCYP78A7a positively functions in eggplant response to salt stress via forming a positive feedback loop with SmWRKY11. Int. J. Biol. Macromol. 269: 132139.
今週の輪読では下記の論文を取り上げました．
2409. Sugihara, Y. et al. (2023). Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector. PLOS Biol. 21: e3001945.
2410. Murphy, K.M. et al. (2023). A dolabralexin-deficient mutant provides insight into specialized diterpenoid metabolism in maize. Plant Physiol. 192: 1338–1358.
2411. Lee, S. et al. (2023). The nuclear effector MoHTR3 of Magnaporthe oryzae modulates host defence signalling in the biotrophic stage of rice infection. Mol. Plant Pathol. 24: 602–615.
2412. Saito, S. et al. (2023). Metabolic engineering of betacyanin in vegetables for anti-inflammatory therapy. Biotechnol. Bioeng. 120: 1357–1365.
2413. Ishibashi, M. et al. (2023). High-throughput analysis of anthocyanins in horticultural crops using probe electrospray ionization tandem mass spectrometry (PESI/MS/MS). Hortic. Res. 10: uhad039.
Shen, L., Zhang, L.-h., Xia, X., Yang, S.-x., and Yang, X. (2024). Cytochrome P450 SmCYP78A7a positively functions in eggplant response to salt stress via forming a positive feedback loop with SmWRKY11. Int. J. Biol. Macromol. 269: 132139.
今週の輪読では下記の論文を取り上げました．
2409. Sugihara, Y. et al. (2023). Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector. PLOS Biol. 21: e3001945.
2410. Murphy, K.M. et al. (2023). A dolabralexin-deficient mutant provides insight into specialized diterpenoid metabolism in maize. Plant Physiol. 192: 1338–1358.
2411. Lee, S. et al. (2023). The nuclear effector MoHTR3 of Magnaporthe oryzae modulates host defence signalling in the biotrophic stage of rice infection. Mol. Plant Pathol. 24: 602–615.
2412. Saito, S. et al. (2023). Metabolic engineering of betacyanin in vegetables for anti-inflammatory therapy. Biotechnol. Bioeng. 120: 1357–1365.
2413. Ishibashi, M. et al. (2023). High-throughput analysis of anthocyanins in horticultural crops using probe electrospray ionization tandem mass spectrometry (PESI/MS/MS). Hortic. Res. 10: uhad039.
生物制御化学研究室ウェブサイトのアドレス変更
2024/06/19 19:18 Filed in: ブログ・HP
長い間，生物制御化学研究室ウェブサイトの URL は http://seigyo.agr.ibaraki.ac.jp でしたが，本日から http;//seibutsuseigyo.lab.ibaraki.ac.jp に変更になりました．
なぜ急に変更したかといいますと，今年度から茨城大学では教員の研究組織「学野」と教育組織「学部」を明確に分けたことが原因になっています．実は今までも研究組織として農学野，教育組織として農学部と一応違いはあったのですが，実質的に一体運用されていました．今年度から阿見キャンパスにいる教員の研究組織は応用生物学野，教育組織は農学部になっています．これで日常的な教育研究業務に大きな違いが出るわけではないのですが，組織としては一応分離するということのようです．その結果，研究室ウェブサイトは文字通り研究のためにあるので，従来の農学部のドメイン agr ではなく lab ドメインを使うということになったようです．
なぜ急に変更したかといいますと，今年度から茨城大学では教員の研究組織「学野」と教育組織「学部」を明確に分けたことが原因になっています．実は今までも研究組織として農学野，教育組織として農学部と一応違いはあったのですが，実質的に一体運用されていました．今年度から阿見キャンパスにいる教員の研究組織は応用生物学野，教育組織は農学部になっています．これで日常的な教育研究業務に大きな違いが出るわけではないのですが，組織としては一応分離するということのようです．その結果，研究室ウェブサイトは文字通り研究のためにあるので，従来の農学部のドメイン agr ではなく lab ドメインを使うということになったようです．
研究室セミナー & 5/29-6/14 の輪読
5/30 の研究室セミナーの文献紹介の担当は化学生態学研究室の修士課程学生で，以下の論文を報告しました．
Lv, H. et al. (2023). Overcoming resistance in insect pest with a nanoparticle-mediated dsRNA and insecticide co-delivery system. Chem. Eng. J. 475: 146239.
6/6 の研究室セミナーの文献紹介の担当は化学生態学研究室の修士課程学生で，以下の論文を報告しました．
Mei, G. et al. (2024). A simple and efficient in planta transformation method based on the active regeneration capacity of plants. Plant Commun. 5: 100822.
6/13 の研究室セミナーの文献紹介の担当は生物制御化学研究室の四年生で，以下の論文を報告しました．
Duan, Y. et al. (2023). Combination of bacterial N-acyl homoserine lactones primes Arabidopsis defenses via jasmonate metabolism. Plant Physiol. 191: 2027–2044.
5/29-6/14 の輪読では下記の論文を取り上げました．
2398. Miwa, T., Ishikawa, O., Takeda-Kimura, Y., and Toyomasu, T. Essential residues in diterpene synthases for biosynthesis of oryzalexins A-F in rice phytoalexin. FEBS J. in press.
2399. Niñoles, R. et al. (2023). Kaempferol-3-rhamnoside overaccumulation in flavonoid 3′-hydroxylase tt7 mutants compromises seed coat outer integument differentiation and seed longevity. New Phytol. 238: 1461–1478.
2400. Song, S. et al. (2023). The functional evolution of architecturally different plant geranyl diphosphate synthases from geranylgeranyl diphosphate synthase. Plant Cell 35: 2293–2315.
2401. Feng, Y., Weers, T., and Peters, R.J. Double-barreled defense: dual ent-miltiradiene synthases in most rice cultivars. aBIOTECH in press.
2402. Tu, C.-K. et al. (2024). The rice endophytic bacterium Bacillus velezensis LS123N provides protection against multiple pathogens and enhances rice resistance to wind with increase in yield. Biol. Control 192: 105507.
2403. Qiu, X. et al. (2023). The Phytophthora sojae nuclear effector PsAvh110 targets a host transcriptional complex to modulate plant immunity. Plant Cell 35: 574–597.
2404. Brunoni, F. et al. (2023). Amino acid conjugation of oxIAA is a secondary metabolic regulation involved in auxin homeostasis. New Phytol. 238: 2264–2270.
2405. Teng, Y. et al. (2024). Genome-wide identification and expression analysis of ent-kaurene synthase-like gene family associated with abiotic stress in rice. Int. J. Mol. Sci. 25: 5513.
2406. Miyata, K. et al. (2023). OsSYMRK plays an essential role in AM symbiosis in rice (Oryza sativa). Plant Cell Physiol. 64: 378–391.
2407. Chini, A., Monte, I., Zamarreño, A.M., García-Mina, J.M., and Solano, R. (2023). Evolution of the jasmonate ligands and their biosynthetic pathways. New Phytol. 238: 2236–2246.
2408. Reed, J. et al. (2023). Elucidation of the pathway for biosynthesis of saponin adjuvants from the soapbark tree. Science 379: 1252–1264.
Lv, H. et al. (2023). Overcoming resistance in insect pest with a nanoparticle-mediated dsRNA and insecticide co-delivery system. Chem. Eng. J. 475: 146239.
6/6 の研究室セミナーの文献紹介の担当は化学生態学研究室の修士課程学生で，以下の論文を報告しました．
Mei, G. et al. (2024). A simple and efficient in planta transformation method based on the active regeneration capacity of plants. Plant Commun. 5: 100822.
6/13 の研究室セミナーの文献紹介の担当は生物制御化学研究室の四年生で，以下の論文を報告しました．
Duan, Y. et al. (2023). Combination of bacterial N-acyl homoserine lactones primes Arabidopsis defenses via jasmonate metabolism. Plant Physiol. 191: 2027–2044.
5/29-6/14 の輪読では下記の論文を取り上げました．
2398. Miwa, T., Ishikawa, O., Takeda-Kimura, Y., and Toyomasu, T. Essential residues in diterpene synthases for biosynthesis of oryzalexins A-F in rice phytoalexin. FEBS J. in press.
2399. Niñoles, R. et al. (2023). Kaempferol-3-rhamnoside overaccumulation in flavonoid 3′-hydroxylase tt7 mutants compromises seed coat outer integument differentiation and seed longevity. New Phytol. 238: 1461–1478.
2400. Song, S. et al. (2023). The functional evolution of architecturally different plant geranyl diphosphate synthases from geranylgeranyl diphosphate synthase. Plant Cell 35: 2293–2315.
2401. Feng, Y., Weers, T., and Peters, R.J. Double-barreled defense: dual ent-miltiradiene synthases in most rice cultivars. aBIOTECH in press.
2402. Tu, C.-K. et al. (2024). The rice endophytic bacterium Bacillus velezensis LS123N provides protection against multiple pathogens and enhances rice resistance to wind with increase in yield. Biol. Control 192: 105507.
2403. Qiu, X. et al. (2023). The Phytophthora sojae nuclear effector PsAvh110 targets a host transcriptional complex to modulate plant immunity. Plant Cell 35: 574–597.
2404. Brunoni, F. et al. (2023). Amino acid conjugation of oxIAA is a secondary metabolic regulation involved in auxin homeostasis. New Phytol. 238: 2264–2270.
2405. Teng, Y. et al. (2024). Genome-wide identification and expression analysis of ent-kaurene synthase-like gene family associated with abiotic stress in rice. Int. J. Mol. Sci. 25: 5513.
2406. Miyata, K. et al. (2023). OsSYMRK plays an essential role in AM symbiosis in rice (Oryza sativa). Plant Cell Physiol. 64: 378–391.
2407. Chini, A., Monte, I., Zamarreño, A.M., García-Mina, J.M., and Solano, R. (2023). Evolution of the jasmonate ligands and their biosynthetic pathways. New Phytol. 238: 2236–2246.
2408. Reed, J. et al. (2023). Elucidation of the pathway for biosynthesis of saponin adjuvants from the soapbark tree. Science 379: 1252–1264.