後学期開始 & 9/25-10/17 の輪読
茨城大学では 9/27（金）から後学期の授業が開始されました．生物制御化学研究室には，後学期から卒業論文を開始する四年生が 1 名，10 月に東京農工大学大学院連合農学研究科に入学した博士課程（社会人〕の学生 1 名が 新たに加わりました．
9/25-10/17 の輪読では下記の論文を取り上げました．
2464. Liu, J. et al. (2023). Tandem intermolecular [4 + 2] cycloadditions are catalysed by glycosylated enzymes for natural product biosynthesis. Nat. Chem. 15: 1083–1090.
2465. Kim, J.H. et al. (2023). 1-Aminocyclopropane-1-carboxylic acid enhances phytoestrogen accumulation in soy plants (Glycine max L.) by Its acceleration of the isoflavone biosynthetic pathway. J. Agric. Food Chem. 71: 10393–10402.
2466. Ezquerro, M. et al. (2023). Tomato geranylgeranyl diphosphate synthase isoform 1 is involved in the stress-triggered production of diterpenes in leaves and strigolactones in roots. New Phytol. 239: 2292–2306.
2467. Lu, Q. et al. (2023). Vanillin in resistant tomato plant root exudate suppresses Meloidogyne incognita parasitism. J. Agric. Food Chem. 71: 10269–10276.
2468. Nagel, R., Alexander, L., Stewart, C., and Peters, R. (2023). Dual factors required for cytochrome-P450-mediated hydrocarbon ring contraction in bacterial gibberellin phytohormone biosynthesis. Proc. Natl. Acad. Sci. U. S. A. 120: e2221549120.
2469. Liao, Z. et al. (2023). A multifunctional true caffeoyl coenzyme A O-methyltransferase enzyme participates in the biosynthesis of polymethoxylated flavones in citrus. Plant Physiol. 192: 2049–2066.
2470. Flubacher, N. et al. (2023). The fungal metabolite 4-hydroxyphenylacetic acid from Neofusicoccum parvum modulates defence responses in grapevine. Plant Cell Environ. 46: 3575–3591.
2471. Bao, T. et al. (2023). Allelic variation of terpene synthases drives terpene diversity in the wild species of the Freesia genus. Plant Physiol. 192: 2419–2435.
2472. Zhou, X. et al. (2023). Plant extracellular self-DNA inhibits growth and induces immunity via the jasmonate signaling pathway. Plant Physiol. 192: 2475–2491.
2473. Tanaka, Y., Fujita, K., Date, M., Watanabe, B., and Matsui, K. (2023). Structure-activity relationship of volatile compounds that induce defense-related genes in maize seedlings. Plant Signaling Behav. 18: 2234115.
9/25-10/17 の輪読では下記の論文を取り上げました．
2464. Liu, J. et al. (2023). Tandem intermolecular [4 + 2] cycloadditions are catalysed by glycosylated enzymes for natural product biosynthesis. Nat. Chem. 15: 1083–1090.
2465. Kim, J.H. et al. (2023). 1-Aminocyclopropane-1-carboxylic acid enhances phytoestrogen accumulation in soy plants (Glycine max L.) by Its acceleration of the isoflavone biosynthetic pathway. J. Agric. Food Chem. 71: 10393–10402.
2466. Ezquerro, M. et al. (2023). Tomato geranylgeranyl diphosphate synthase isoform 1 is involved in the stress-triggered production of diterpenes in leaves and strigolactones in roots. New Phytol. 239: 2292–2306.
2467. Lu, Q. et al. (2023). Vanillin in resistant tomato plant root exudate suppresses Meloidogyne incognita parasitism. J. Agric. Food Chem. 71: 10269–10276.
2468. Nagel, R., Alexander, L., Stewart, C., and Peters, R. (2023). Dual factors required for cytochrome-P450-mediated hydrocarbon ring contraction in bacterial gibberellin phytohormone biosynthesis. Proc. Natl. Acad. Sci. U. S. A. 120: e2221549120.
2469. Liao, Z. et al. (2023). A multifunctional true caffeoyl coenzyme A O-methyltransferase enzyme participates in the biosynthesis of polymethoxylated flavones in citrus. Plant Physiol. 192: 2049–2066.
2470. Flubacher, N. et al. (2023). The fungal metabolite 4-hydroxyphenylacetic acid from Neofusicoccum parvum modulates defence responses in grapevine. Plant Cell Environ. 46: 3575–3591.
2471. Bao, T. et al. (2023). Allelic variation of terpene synthases drives terpene diversity in the wild species of the Freesia genus. Plant Physiol. 192: 2419–2435.
2472. Zhou, X. et al. (2023). Plant extracellular self-DNA inhibits growth and induces immunity via the jasmonate signaling pathway. Plant Physiol. 192: 2475–2491.
2473. Tanaka, Y., Fujita, K., Date, M., Watanabe, B., and Matsui, K. (2023). Structure-activity relationship of volatile compounds that induce defense-related genes in maize seedlings. Plant Signaling Behav. 18: 2234115.
9/9-9/19 の輪読
2024/09/19 15:45 Filed in: 輪読
9/9-9/19 の輪読では下記の論文を取り上げました．
2457. Guo, J. et al. (2023). A tripartite rheostat controls self-regulated host plant resistance to insects. Nature 618: 799–807.
2458. Qi, J. et al. (2023). OsRbohI regulates rice growth and development via jasmonic acid signalling. Plant Cell Physiol. 64: 686–699.
2459. Ishikawa, K. et al. Rice transcription factor DPF regulates stress-induced biosynthesis of diterpenoid phytoalexins. Biosci. Biotechnol. Biochem. in press.
2460. Dwivedi, A.K., Singh, V., Anwar, K., Pareek, A., and Jain, M. (2023). Integrated transcriptome, proteome and metabolome analyses revealed secondary metabolites and auxiliary carbohydrate metabolism augmenting drought tolerance in rice. Plant Physiol. Biochem. 201: 107849.
2461. Wang, M. et al. (2023). Melatonin induces resistance against Penicillium expansum in apple fruit through enhancing phenylpropanoid metabolism. Physiol. Mol. Plant Pathol. 127: 102082.
2462. Oliveira-Garcia, E. et al. (2023). Clathrin-mediated endocytosis facilitates the internalization of Magnaporthe oryzae effectors into rice cells. Plant Cell 35: 2527–2551.
2463. Singh, P. et al. (2024). Microbial volatiles (mVOCs) induce tomato plant growth and disease resistance against wilt pathogen Fusarium oxysporum f.sp. lycopersici. J. Plant Growth Regul. 43: 3105–3118.
2457. Guo, J. et al. (2023). A tripartite rheostat controls self-regulated host plant resistance to insects. Nature 618: 799–807.
2458. Qi, J. et al. (2023). OsRbohI regulates rice growth and development via jasmonic acid signalling. Plant Cell Physiol. 64: 686–699.
2459. Ishikawa, K. et al. Rice transcription factor DPF regulates stress-induced biosynthesis of diterpenoid phytoalexins. Biosci. Biotechnol. Biochem. in press.
2460. Dwivedi, A.K., Singh, V., Anwar, K., Pareek, A., and Jain, M. (2023). Integrated transcriptome, proteome and metabolome analyses revealed secondary metabolites and auxiliary carbohydrate metabolism augmenting drought tolerance in rice. Plant Physiol. Biochem. 201: 107849.
2461. Wang, M. et al. (2023). Melatonin induces resistance against Penicillium expansum in apple fruit through enhancing phenylpropanoid metabolism. Physiol. Mol. Plant Pathol. 127: 102082.
2462. Oliveira-Garcia, E. et al. (2023). Clathrin-mediated endocytosis facilitates the internalization of Magnaporthe oryzae effectors into rice cells. Plant Cell 35: 2527–2551.
2463. Singh, P. et al. (2024). Microbial volatiles (mVOCs) induce tomato plant growth and disease resistance against wilt pathogen Fusarium oxysporum f.sp. lycopersici. J. Plant Growth Regul. 43: 3105–3118.
8/19-9/5 の輪読
2024/09/08 16:17 Filed in: 輪読
8/19-9/5 の輪読では下記の論文を取り上げました．
2446. Zhao, Q. et al. (2023). Calcium-binding protein OsANN1 regulates rice blast disease resistance by inactivating jasmonic acid signaling. Plant Physiol. 192: 1621–1637.
2447. Du, Y. et al. (2023). Sufficient coumarin accumulation improves apple resistance to Cytospora mali under high-potassium status. Plant Physiol. 192: 1396–1419.
2448. Cárdenas, P.D. et al. (2023). Phytoalexins of the crucifer Barbarea vulgaris: Structural profile and correlation with glucosinolate turnover. Phytochemistry 213: 113742.
2449. Yubo, S. et al. (2023). Protein elicitor GP1pro targets aquaporin NbPIP2;4 to activate plant immunity. Plant Cell Environ. 46: 2575–2589.
2450. Lu, H.-H. et al. (2023). Identification of a damage-associated molecular pattern (DAMP) receptor and its cognate peptide ligand in sweet potato (Ipomoea batatas). Plant Cell Environ. 46: 2558–2574.
2451. Tang, B. et al. (2023). Rgs1 is a regulator of effector gene expression during plant infection by the rice blast fungus Magnaporthe oryzae. Proc. Natl. Acad. Sci. U. S. A. 120: e2301358120.
2452. Li, H. et al. (2023). Infestation by the piercing–sucking herbivore Nilaparvata lugens systemically triggers JA- and SA-dependent defense responses in rice. Biology 12: 820.
2453. Chen, X. et al. (2023). Rab7/Retromer-based endolysosomal trafficking is essential for proper host invasion in rice blast. New Phytol. 239: 1384–1403.
2454. Singh, L. et al. (2023). Wheat pore-forming toxin-like protein confers broad-spectrum resistance to fungal pathogens in Arabidopsis. Mol. Plant-Microbe Interact. 36: 489–501.
2455. Chen, X. et al. (2023). A nonclassically secreted effector of Magnaporthe oryzae targets host nuclei and plays important roles in fungal growth and plant infection. Mol. Plant Pathol. 24: 1093–1106.
2456. Sha, G. et al. (2023). Genome editing of a rice CDP-DAG synthase confers multipathogen resistance. Nature 618: 1017–1023.
2446. Zhao, Q. et al. (2023). Calcium-binding protein OsANN1 regulates rice blast disease resistance by inactivating jasmonic acid signaling. Plant Physiol. 192: 1621–1637.
2447. Du, Y. et al. (2023). Sufficient coumarin accumulation improves apple resistance to Cytospora mali under high-potassium status. Plant Physiol. 192: 1396–1419.
2448. Cárdenas, P.D. et al. (2023). Phytoalexins of the crucifer Barbarea vulgaris: Structural profile and correlation with glucosinolate turnover. Phytochemistry 213: 113742.
2449. Yubo, S. et al. (2023). Protein elicitor GP1pro targets aquaporin NbPIP2;4 to activate plant immunity. Plant Cell Environ. 46: 2575–2589.
2450. Lu, H.-H. et al. (2023). Identification of a damage-associated molecular pattern (DAMP) receptor and its cognate peptide ligand in sweet potato (Ipomoea batatas). Plant Cell Environ. 46: 2558–2574.
2451. Tang, B. et al. (2023). Rgs1 is a regulator of effector gene expression during plant infection by the rice blast fungus Magnaporthe oryzae. Proc. Natl. Acad. Sci. U. S. A. 120: e2301358120.
2452. Li, H. et al. (2023). Infestation by the piercing–sucking herbivore Nilaparvata lugens systemically triggers JA- and SA-dependent defense responses in rice. Biology 12: 820.
2453. Chen, X. et al. (2023). Rab7/Retromer-based endolysosomal trafficking is essential for proper host invasion in rice blast. New Phytol. 239: 1384–1403.
2454. Singh, L. et al. (2023). Wheat pore-forming toxin-like protein confers broad-spectrum resistance to fungal pathogens in Arabidopsis. Mol. Plant-Microbe Interact. 36: 489–501.
2455. Chen, X. et al. (2023). A nonclassically secreted effector of Magnaporthe oryzae targets host nuclei and plays important roles in fungal growth and plant infection. Mol. Plant Pathol. 24: 1093–1106.
2456. Sha, G. et al. (2023). Genome editing of a rice CDP-DAG synthase confers multipathogen resistance. Nature 618: 1017–1023.
夏季休業 & 8/5-9 の輪読
茨城大学では 8/6 までで夏休み前の授業が終了して，夏季休業期間に入りました．
8/5-9 の輪読では下記の論文を取り上げました．
2441. Xiao, X., Hu, A.Y., Dong, X.Y., Shen, R.F., and Zhao, X.Q. (2023). Involvement of the 4-coumarate:coenzyme A ligase 4CL4 in rice phosphorus acquisition and rhizosphere microbe recruitment via root growth enlargement. Planta 258: 7.
2442. Burns, A.R. et al. (2023). Selective control of parasitic nematodes using bioactivated nematicides. Nature 618: 102–109.
2443. Ramos, R.N. et al. (2023). Loss-of-function mutations in WRKY22 and WRKY25 impair stomatal-mediated immunity and PTI and ETI responses against Pseudomonas syringae pv. tomato. Plant Mol. Biol. 112: 161–177.
2444. Kalboush, Z.A., Abdelkhalek, S.M., Anis, G.B., Hassan, A.A., and Gabr, W.E. (2023). Phenotypic and molecular identification of some blast resistance genes and biochemical responses of rice genotypes against rice blast pathogen. Physiol. Mol. Plant Pathol. 127: 102052.
2445. Jalilian, A. et al. (2023). The RLCK subfamily VII-4 controls pattern-triggered immunity and basal resistance to bacterial and fungal pathogens in rice. Plant J. 115: 1345–1356.
8/5-9 の輪読では下記の論文を取り上げました．
2441. Xiao, X., Hu, A.Y., Dong, X.Y., Shen, R.F., and Zhao, X.Q. (2023). Involvement of the 4-coumarate:coenzyme A ligase 4CL4 in rice phosphorus acquisition and rhizosphere microbe recruitment via root growth enlargement. Planta 258: 7.
2442. Burns, A.R. et al. (2023). Selective control of parasitic nematodes using bioactivated nematicides. Nature 618: 102–109.
2443. Ramos, R.N. et al. (2023). Loss-of-function mutations in WRKY22 and WRKY25 impair stomatal-mediated immunity and PTI and ETI responses against Pseudomonas syringae pv. tomato. Plant Mol. Biol. 112: 161–177.
2444. Kalboush, Z.A., Abdelkhalek, S.M., Anis, G.B., Hassan, A.A., and Gabr, W.E. (2023). Phenotypic and molecular identification of some blast resistance genes and biochemical responses of rice genotypes against rice blast pathogen. Physiol. Mol. Plant Pathol. 127: 102052.
2445. Jalilian, A. et al. (2023). The RLCK subfamily VII-4 controls pattern-triggered immunity and basal resistance to bacterial and fungal pathogens in rice. Plant J. 115: 1345–1356.
今週の輪読
2024/08/03 19:01 Filed in: 輪読
今週の輪読では下記の論文を取り上げました．
2436. Nguyen, T.H. et al. (2023). A redundant transcription factor network steers spatiotemporal Arabidopsis triterpene synthesis. Nat. Plants 9: 926–937.
2437. Liu, J. et al. (2023). Rice ubiquitin-conjugating enzyme OsUbc13 negatively regulates immunity against pathogens by enhancing the activity of OsSnRK1a. Plant Biotechnol. J. 21: 1590–1610.
2438. Yue, J. et al. (2023). Methyltransferase-like (METTL) homologues participate in Nicotiana benthamiana antiviral responses. Plant Signaling Behav. 18: 2214760.
2439. Koh, E., Chaturvedi, A.K., Javitt, G., Brandis, A., and Fluhr, R. (2023). Multiple paths of plant host toxicity are associated with the fungal toxin cercosporin. Plant Cell Environ. 46: 2542–2557.
2440. Tseng, B.-S. et al. (2023). Hydrogen peroxide regulates the Osa-miR156-OsSPL2/OsTIFY11b module in rice. Plant Cell Environ. 46: 2507–2522.
2436. Nguyen, T.H. et al. (2023). A redundant transcription factor network steers spatiotemporal Arabidopsis triterpene synthesis. Nat. Plants 9: 926–937.
2437. Liu, J. et al. (2023). Rice ubiquitin-conjugating enzyme OsUbc13 negatively regulates immunity against pathogens by enhancing the activity of OsSnRK1a. Plant Biotechnol. J. 21: 1590–1610.
2438. Yue, J. et al. (2023). Methyltransferase-like (METTL) homologues participate in Nicotiana benthamiana antiviral responses. Plant Signaling Behav. 18: 2214760.
2439. Koh, E., Chaturvedi, A.K., Javitt, G., Brandis, A., and Fluhr, R. (2023). Multiple paths of plant host toxicity are associated with the fungal toxin cercosporin. Plant Cell Environ. 46: 2542–2557.
2440. Tseng, B.-S. et al. (2023). Hydrogen peroxide regulates the Osa-miR156-OsSPL2/OsTIFY11b module in rice. Plant Cell Environ. 46: 2507–2522.